STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
T1HX46_RHOPRF-box domain-containing protein. (467 aa)    
Predicted Functional Partners:
R4G4F5_RHOPR
Putative scf ubiquitin ligase; Belongs to the SKP1 family.
    
 0.896
T1HGK2_RHOPR
RING-type domain-containing protein.
    
 0.881
T1I6V3_RHOPR
F-box domain-containing protein.
    
 0.824
T1HTN0_RHOPR
Ribosomal_L2_C domain-containing protein.
    
 0.821
T1HWK9_RHOPR
Supernumerary limbs.
   
 0.814
R4G4B9_RHOPR
Putative ribosomal protein l40.
    
  0.790
R4FMU0_RHOPR
Putative ubiquitin-like protein.
    
 0.729
T1I7H5_RHOPR
Uncharacterized protein.
    
 0.729
R4FL16_RHOPR
Putative nedd8 also known as rub1 has a single conserved ubiquitin-like protein.
    
 0.714
T1IBZ5_RHOPR
Uncharacterized protein.
    
 0.672
Your Current Organism:
Rhodnius prolixus
NCBI taxonomy Id: 13249
Other names: R. prolixus
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