Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
R4FM46_RHOPR | R4FNV5_RHOPR | R4FM46 | R4FNV5 | Putative biotinidase. | Putative spermidine synthase; Belongs to the spermidine/spermine synthase family. | 0.811 |
R4FM46_RHOPR | T1HB17_RHOPR | R4FM46 | T1HB17 | Putative biotinidase. | S-adenosylmethionine decarboxylase proenzyme. | 0.553 |
R4FM46_RHOPR | T1HYK3_RHOPR | R4FM46 | T1HYK3 | Putative biotinidase. | SpmSyn_N domain-containing protein. | 0.811 |
R4FM46_RHOPR | T1I070_RHOPR | R4FM46 | T1I070 | Putative biotinidase. | Uncharacterized protein; Belongs to the Orn/Lys/Arg decarboxylase class-II family. | 0.815 |
R4FNV5_RHOPR | R4FM46_RHOPR | R4FNV5 | R4FM46 | Putative spermidine synthase; Belongs to the spermidine/spermine synthase family. | Putative biotinidase. | 0.811 |
R4FNV5_RHOPR | R4G3C0_RHOPR | R4FNV5 | R4G3C0 | Putative spermidine synthase; Belongs to the spermidine/spermine synthase family. | Putative carbon-nitrogen hydrolase. | 0.926 |
R4FNV5_RHOPR | R4G8P7_RHOPR | R4FNV5 | R4G8P7 | Putative spermidine synthase; Belongs to the spermidine/spermine synthase family. | S-methyl-5'-thioadenosine phosphorylase; Catalyzes the reversible phosphorylation of S-methyl-5'- thioadenosine (MTA) to adenine and 5-methylthioribose-1-phosphate. Involved in the breakdown of MTA, a major by-product of polyamine biosynthesis. Responsible for the first step in the methionine salvage pathway after MTA has been generated from S-adenosylmethionine. Has broad substrate specificity with 6-aminopurine nucleosides as preferred substrates. | 0.924 |
R4FNV5_RHOPR | T1HB17_RHOPR | R4FNV5 | T1HB17 | Putative spermidine synthase; Belongs to the spermidine/spermine synthase family. | S-adenosylmethionine decarboxylase proenzyme. | 0.969 |
R4FNV5_RHOPR | T1HKN1_RHOPR | R4FNV5 | T1HKN1 | Putative spermidine synthase; Belongs to the spermidine/spermine synthase family. | S-adenosylmethionine synthase; Catalyzes the formation of S-adenosylmethionine from methionine and ATP. | 0.849 |
R4FNV5_RHOPR | T1HND8_RHOPR | R4FNV5 | T1HND8 | Putative spermidine synthase; Belongs to the spermidine/spermine synthase family. | Amino_oxidase domain-containing protein. | 0.907 |
R4FNV5_RHOPR | T1HYK3_RHOPR | R4FNV5 | T1HYK3 | Putative spermidine synthase; Belongs to the spermidine/spermine synthase family. | SpmSyn_N domain-containing protein. | 0.917 |
R4FNV5_RHOPR | T1HZJ0_RHOPR | R4FNV5 | T1HZJ0 | Putative spermidine synthase; Belongs to the spermidine/spermine synthase family. | PNP_UDP_1 domain-containing protein. | 0.834 |
R4FNV5_RHOPR | T1I070_RHOPR | R4FNV5 | T1I070 | Putative spermidine synthase; Belongs to the spermidine/spermine synthase family. | Uncharacterized protein; Belongs to the Orn/Lys/Arg decarboxylase class-II family. | 0.972 |
R4FNV5_RHOPR | T1I729_RHOPR | R4FNV5 | T1I729 | Putative spermidine synthase; Belongs to the spermidine/spermine synthase family. | S-adenosylmethionine synthase; Catalyzes the formation of S-adenosylmethionine from methionine and ATP. | 0.849 |
R4G3C0_RHOPR | R4FNV5_RHOPR | R4G3C0 | R4FNV5 | Putative carbon-nitrogen hydrolase. | Putative spermidine synthase; Belongs to the spermidine/spermine synthase family. | 0.926 |
R4G3C0_RHOPR | T1HB17_RHOPR | R4G3C0 | T1HB17 | Putative carbon-nitrogen hydrolase. | S-adenosylmethionine decarboxylase proenzyme. | 0.568 |
R4G3C0_RHOPR | T1HYK3_RHOPR | R4G3C0 | T1HYK3 | Putative carbon-nitrogen hydrolase. | SpmSyn_N domain-containing protein. | 0.811 |
R4G3C0_RHOPR | T1I070_RHOPR | R4G3C0 | T1I070 | Putative carbon-nitrogen hydrolase. | Uncharacterized protein; Belongs to the Orn/Lys/Arg decarboxylase class-II family. | 0.815 |
R4G8P7_RHOPR | R4FNV5_RHOPR | R4G8P7 | R4FNV5 | S-methyl-5'-thioadenosine phosphorylase; Catalyzes the reversible phosphorylation of S-methyl-5'- thioadenosine (MTA) to adenine and 5-methylthioribose-1-phosphate. Involved in the breakdown of MTA, a major by-product of polyamine biosynthesis. Responsible for the first step in the methionine salvage pathway after MTA has been generated from S-adenosylmethionine. Has broad substrate specificity with 6-aminopurine nucleosides as preferred substrates. | Putative spermidine synthase; Belongs to the spermidine/spermine synthase family. | 0.924 |
R4G8P7_RHOPR | T1HB17_RHOPR | R4G8P7 | T1HB17 | S-methyl-5'-thioadenosine phosphorylase; Catalyzes the reversible phosphorylation of S-methyl-5'- thioadenosine (MTA) to adenine and 5-methylthioribose-1-phosphate. Involved in the breakdown of MTA, a major by-product of polyamine biosynthesis. Responsible for the first step in the methionine salvage pathway after MTA has been generated from S-adenosylmethionine. Has broad substrate specificity with 6-aminopurine nucleosides as preferred substrates. | S-adenosylmethionine decarboxylase proenzyme. | 0.537 |
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