STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ESP89648.1Metallo-beta-lactamase superfamily protein; COG0491 Zn-dependent hydrolases, including glyoxylases. (244 aa)    
Predicted Functional Partners:
ESP90122.1
Fused rhodanese domain-containing protein/hydrolase; COG0607 Rhodanese-related sulfurtransferase.
  
 0.789
ESP90128.1
Beta-lactamase; COG0607 Rhodanese-related sulfurtransferase.
  
 0.789
ESP88577.1
Beta-lactamase; COG0607 Rhodanese-related sulfurtransferase.
  
 0.789
ESP89647.1
Hypothetical protein.
       0.697
ESP88344.1
ferredoxin--NAD(+) reductase; COG0446 Uncharacterized NAD(FAD)-dependent dehydrogenases.
   
 0.530
rpoL
DNA-directed RNA polymerase subunit L; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal RpoL/eukaryotic RPB11/RPC19 RNA polymerase subunit family.
       0.499
ESP87697.1
COG0491 Zn-dependent hydrolases, including glyoxylases.
  
  
  0.483
ESP89631.1
Hypothetical protein; COG0607 Rhodanese-related sulfurtransferase.
  
 0.435
ESP87288.1
COG0607 Rhodanese-related sulfurtransferase.
  
 0.435
ESP89868.1
Glyoxalase/bleomycin resistance protein/dioxygenase; COG0346 Lactoylglutathione lyase and related lyases.
     
 0.409
Your Current Organism:
Halobonum tyrrellensis
NCBI taxonomy Id: 1324957
Other names: C. Halobonum tyrrellensis G22, Candidatus Halobonum tyrrellensis G22, Halobacteriaceae archaeon G22, Halobonum tyrrellensis G22
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.