STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ESP87076.1Binding-protein-dependent transport systems inner membrane component; COG0395 ABC-type sugar transport system, permease component; overlaps another CDS with the same product name. (278 aa)    
Predicted Functional Partners:
ESP87077.1
COG1175 ABC-type sugar transport systems, permease components; overlaps another CDS with the same product name.
  0.980
ESP86794.1
COG1175 ABC-type sugar transport systems, permease components; overlaps another CDS with the same product name.
 
  0.916
ESP89358.1
COG1175 ABC-type sugar transport systems, permease components.
 
  0.914
ESP89752.1
ABC transporter integral membrane protein; COG1175 ABC-type sugar transport systems, permease components.
 
  0.894
ESP87078.1
Extracellular solute-binding protein family 1; COG1653 ABC-type sugar transport system, periplasmic component.
 
  0.894
ESP89779.1
COG1175 ABC-type sugar transport systems, permease components.
  
  0.891
ESP89832.1
COG1175 ABC-type sugar transport systems, permease components.
 
  0.891
ESP87063.1
COG1175 ABC-type sugar transport systems, permease components.
 
  0.887
ESP87365.1
COG1175 ABC-type sugar transport systems, permease components.
 
  0.870
ESP90216.1
COG1175 ABC-type sugar transport systems, permease components.
  
  0.842
Your Current Organism:
Halobonum tyrrellensis
NCBI taxonomy Id: 1324957
Other names: C. Halobonum tyrrellensis G22, Candidatus Halobonum tyrrellensis G22, Halobacteriaceae archaeon G22, Halobonum tyrrellensis G22
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