STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NSJP_0693Putative Cytochrome c; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology. (155 aa)    
Predicted Functional Partners:
qcrB
Quinol-cytochrome c reductase, fused cytochrome b/c subunit.
  
 
 0.966
NSJP_1856
Homologs of previously reported genes of unknown function.
  
     0.765
NSJP_1074
Putative Cytochrome c552; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
  
     0.733
NSJP_0130
Homologs of previously reported genes of unknown function.
  
     0.727
NSJP_1858
Homologs of previously reported genes of unknown function.
 
 
 0.722
NSJP_0132
Homologs of previously reported genes of unknown function.
  
     0.713
NSJP_0129
Putative Cytochrome c (Modular protein); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
  
     0.709
NSJP_0139
Homologs of previously reported genes of unknown function.
  
     0.704
NSJP_1854
Homologs of previously reported genes of unknown function.
  
     0.689
NSJP_1857
Putative Nitrate oxidoreductase, gamma subunit; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
  
     0.684
Your Current Organism:
Nitrospira japonica
NCBI taxonomy Id: 1325564
Other names: N. japonica, Nitrospira sp. NJ1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.