STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NSJP_0718Homologs of previously reported genes of unknown function. (374 aa)    
Predicted Functional Partners:
NSJP_0719
Putative Peptidase M; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
 
     0.860
NSJP_0720
Putative Response regulator, CheY-like; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
       0.813
NSJP_0717
Homologs of previously reported genes of unknown function.
       0.744
NSJP_0072
Putative Peptidase, M28 family; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
     0.648
ftsY
Signal recognition particle receptor FtsY; Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC).
     
 0.613
ybeZ
Putative enzyme with nucleoside triphosphate hydrolase domain; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
  
    0.607
ybeY
Endoribonuclease YbeY; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA.
       0.603
NSJP_2042
Homologs of previously reported genes of unknown function.
  
 
 
 0.572
NSJP_0189
Putative Extracellular ligand-binding receptor; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
  
  
 0.494
NSJP_0485
Putative Soluble lytic murein transglycosylase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
  
  
 0.490
Your Current Organism:
Nitrospira japonica
NCBI taxonomy Id: 1325564
Other names: N. japonica, Nitrospira sp. NJ1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.