STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NSJP_1126Response regulator, LuxR family. (241 aa)    
Predicted Functional Partners:
NSJP_1081
Putative Histidine kinase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
 
 0.836
NSJP_2850
Protein of unknown function; No homology to any previously reported sequences.
  
   0.834
NSJP_2062
Membrane protein of unknown function; No homology to any previously reported sequences.
 
   0.833
NSJP_1218
Putative Histidine kinase with N-terminal NAD-binding region; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
 
   0.830
NSJP_1609
Putative two-component sensor histidine kinase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
  
   0.830
NSJP_2552
Membrane protein of unknown function; No homology to any previously reported sequences.
 
 
   0.817
NSJP_0382
Two component transcriptional regulator, LuxR family (fragment).
  
     0.759
NSJP_1504
Response regulator receiver protein (fragment).
  
     0.754
NSJP_1607
Protein of unknown function; No homology to any previously reported sequences.
 
 
 
 0.733
NSJP_1955
Protein of unknown function; No homology to any previously reported sequences.
 
 
0.600
Your Current Organism:
Nitrospira japonica
NCBI taxonomy Id: 1325564
Other names: N. japonica, Nitrospira sp. NJ1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.