STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NSJP_3446Homologs of previously reported genes of unknown function. (796 aa)    
Predicted Functional Partners:
NSJP_3445
Putative polysaccharide export protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
 
     0.943
NSJP_3443
Putative Lipopolysaccharide biosynthesis protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
 
     0.913
NSJP_3448
Homologs of previously reported genes of unknown function.
 
     0.910
NSJP_3444
Homologs of previously reported genes of unknown function.
 
     0.904
NSJP_3442
Putative Exopolysaccharide biosynthesis related tyrosine-protein kinase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
 
     0.843
NSJP_3447
UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
 
    0.817
NSJP_3441
Homologs of previously reported genes of unknown function.
 
     0.808
NSJP_3782
Putative Lipopolysaccharide biosynthesis protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
 
     0.690
NSJP_4069
Putative Polysaccharide export protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
 
     0.690
NSJP_0109
Homologs of previously reported genes of unknown function.
  
     0.685
Your Current Organism:
Nitrospira japonica
NCBI taxonomy Id: 1325564
Other names: N. japonica, Nitrospira sp. NJ1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.