node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
NSJP_4071 | nusA | NSJP_4071 | NSJP_0767 | Putative Transcription antitermination protein RfaH; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology. | Transcription termination/antitermination protein NusA; Participates in both transcription termination and antitermination. | 0.814 |
NSJP_4071 | rho | NSJP_4071 | NSJP_1999 | Putative Transcription antitermination protein RfaH; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology. | Transcription termination factor; Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA- dependent ATPase activity, and release of the mRNA from the DNA template. | 0.807 |
NSJP_4071 | rplJL | NSJP_4071 | NSJP_2330 | Putative Transcription antitermination protein RfaH; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology. | Fused 50S ribosomal proteins L10 and L7/L12 (Modular protein); Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation; Belongs to the bacterial ribosomal protein bL12 family. | 0.992 |
NSJP_4071 | rplK | NSJP_4071 | NSJP_2328 | Putative Transcription antitermination protein RfaH; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology. | 50S ribosomal protein L11; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. | 0.806 |
NSJP_4071 | rplN | NSJP_4071 | NSJP_2348 | Putative Transcription antitermination protein RfaH; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology. | 50S ribosomal protein L14; Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome; Belongs to the universal ribosomal protein uL14 family. | 0.806 |
NSJP_4071 | rpoB | NSJP_4071 | NSJP_2331 | Putative Transcription antitermination protein RfaH; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology. | RNA polymerase, beta subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.924 |
NSJP_4071 | rpoC | NSJP_4071 | NSJP_2332 | Putative Transcription antitermination protein RfaH; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology. | RNA polymerase, beta prime subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.885 |
NSJP_4071 | rpsC | NSJP_4071 | NSJP_2344 | Putative Transcription antitermination protein RfaH; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology. | 30S ribosomal subunit protein S3; Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation; Belongs to the universal ribosomal protein uS3 family. | 0.827 |
NSJP_4071 | rpsG | NSJP_4071 | NSJP_2334 | Putative Transcription antitermination protein RfaH; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology. | 30S ribosomal subunit protein S7; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA; Belongs to the universal ribosomal protein uS7 family. | 0.806 |
NSJP_4071 | rpsJ | NSJP_4071 | NSJP_2337 | Putative Transcription antitermination protein RfaH; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology. | 30S ribosomal protein S10; Involved in the binding of tRNA to the ribosomes. Belongs to the universal ribosomal protein uS10 family. | 0.824 |
nusA | NSJP_4071 | NSJP_0767 | NSJP_4071 | Transcription termination/antitermination protein NusA; Participates in both transcription termination and antitermination. | Putative Transcription antitermination protein RfaH; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology. | 0.814 |
nusA | rho | NSJP_0767 | NSJP_1999 | Transcription termination/antitermination protein NusA; Participates in both transcription termination and antitermination. | Transcription termination factor; Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA- dependent ATPase activity, and release of the mRNA from the DNA template. | 0.922 |
nusA | rplJL | NSJP_0767 | NSJP_2330 | Transcription termination/antitermination protein NusA; Participates in both transcription termination and antitermination. | Fused 50S ribosomal proteins L10 and L7/L12 (Modular protein); Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation; Belongs to the bacterial ribosomal protein bL12 family. | 0.997 |
nusA | rplK | NSJP_0767 | NSJP_2328 | Transcription termination/antitermination protein NusA; Participates in both transcription termination and antitermination. | 50S ribosomal protein L11; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. | 0.980 |
nusA | rplN | NSJP_0767 | NSJP_2348 | Transcription termination/antitermination protein NusA; Participates in both transcription termination and antitermination. | 50S ribosomal protein L14; Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome; Belongs to the universal ribosomal protein uL14 family. | 0.931 |
nusA | rpoB | NSJP_0767 | NSJP_2331 | Transcription termination/antitermination protein NusA; Participates in both transcription termination and antitermination. | RNA polymerase, beta subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.985 |
nusA | rpoC | NSJP_0767 | NSJP_2332 | Transcription termination/antitermination protein NusA; Participates in both transcription termination and antitermination. | RNA polymerase, beta prime subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.979 |
nusA | rpsC | NSJP_0767 | NSJP_2344 | Transcription termination/antitermination protein NusA; Participates in both transcription termination and antitermination. | 30S ribosomal subunit protein S3; Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation; Belongs to the universal ribosomal protein uS3 family. | 0.964 |
nusA | rpsG | NSJP_0767 | NSJP_2334 | Transcription termination/antitermination protein NusA; Participates in both transcription termination and antitermination. | 30S ribosomal subunit protein S7; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA; Belongs to the universal ribosomal protein uS7 family. | 0.979 |
nusA | rpsJ | NSJP_0767 | NSJP_2337 | Transcription termination/antitermination protein NusA; Participates in both transcription termination and antitermination. | 30S ribosomal protein S10; Involved in the binding of tRNA to the ribosomes. Belongs to the universal ribosomal protein uS10 family. | 0.975 |