STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CEP54_009708Zn(2)-C6 fungal-type domain-containing protein. (736 aa)    
Predicted Functional Partners:
CEP54_000568
CFEM domain-containing protein.
    
 0.730
CEP54_000974
DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
   
 0.712
CEP54_000161
Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
    
 0.710
CEP54_000160
Uncharacterized protein.
    
 0.710
CEP54_000162
Uncharacterized protein.
    
 0.710
CEP54_015245
AMP-binding domain-containing protein.
    
 0.664
CEP54_012142
Uncharacterized protein.
    
 0.664
CEP54_011974
Uncharacterized protein.
    
 0.664
CEP54_002031
AMP-binding domain-containing protein.
    
 0.664
CEP54_010992
Uncharacterized protein.
    
  0.654
Your Current Organism:
Fusarium sp. AF8
NCBI taxonomy Id: 1325734
Other names: F. sp. AF-8, Fusarium sp. AF-8
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