STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CEP54_007821Zn(2)-C6 fungal-type domain-containing protein. (526 aa)    
Predicted Functional Partners:
CEP54_006110
WD_REPEATS_REGION domain-containing protein.
   
 0.621
CEP54_012489
Ipi1_N domain-containing protein.
   
 0.594
NOP7
Pescadillo homolog; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.
   
 0.558
CEP54_016173
Protein kinase domain-containing protein.
    
  0.513
ERB1
Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.
   
  0.488
CEP54_006518
Polynucleotide 5'-hydroxyl-kinase GRC3.
   
  0.469
CEP54_007098
CP-type G domain-containing protein.
   
  0.458
CEP54_004139
Uncharacterized protein.
    
  0.455
CEP54_000895
CRIB domain-containing protein.
    
  0.455
CEP54_000529
Uncharacterized protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.
   
 0.450
Your Current Organism:
Fusarium sp. AF8
NCBI taxonomy Id: 1325734
Other names: F. sp. AF-8, Fusarium sp. AF-8
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