Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CEP54_000144 | CEP54_001475 | A0A428R8U4 | A0A428R0D1 | Elongator complex protein 3; Catalytic tRNA acetyltransferase subunit of the RNA polymerase II elongator complex, which is a component of the RNA polymerase II (Pol II) holoenzyme and is involved in transcriptional elongation. | Uncharacterized protein. | 0.945 |
CEP54_000144 | CEP54_002050 | A0A428R8U4 | A0A428QXT4 | Elongator complex protein 3; Catalytic tRNA acetyltransferase subunit of the RNA polymerase II elongator complex, which is a component of the RNA polymerase II (Pol II) holoenzyme and is involved in transcriptional elongation. | Uncharacterized protein. | 0.972 |
CEP54_000144 | CEP54_002051 | A0A428R8U4 | A0A428QXL9 | Elongator complex protein 3; Catalytic tRNA acetyltransferase subunit of the RNA polymerase II elongator complex, which is a component of the RNA polymerase II (Pol II) holoenzyme and is involved in transcriptional elongation. | Uncharacterized protein. | 0.972 |
CEP54_000144 | CEP54_006110 | A0A428R8U4 | A0A428Q937 | Elongator complex protein 3; Catalytic tRNA acetyltransferase subunit of the RNA polymerase II elongator complex, which is a component of the RNA polymerase II (Pol II) holoenzyme and is involved in transcriptional elongation. | WD_REPEATS_REGION domain-containing protein. | 0.425 |
CEP54_000144 | CEP54_007098 | A0A428R8U4 | A0A428Q3E1 | Elongator complex protein 3; Catalytic tRNA acetyltransferase subunit of the RNA polymerase II elongator complex, which is a component of the RNA polymerase II (Pol II) holoenzyme and is involved in transcriptional elongation. | CP-type G domain-containing protein. | 0.619 |
CEP54_000144 | CEP54_007714 | A0A428R8U4 | A0A428Q057 | Elongator complex protein 3; Catalytic tRNA acetyltransferase subunit of the RNA polymerase II elongator complex, which is a component of the RNA polymerase II (Pol II) holoenzyme and is involved in transcriptional elongation. | DPBB_1 domain-containing protein. | 0.915 |
CEP54_000144 | CEP54_007755 | A0A428R8U4 | A0A428PZN5 | Elongator complex protein 3; Catalytic tRNA acetyltransferase subunit of the RNA polymerase II elongator complex, which is a component of the RNA polymerase II (Pol II) holoenzyme and is involved in transcriptional elongation. | Uncharacterized protein. | 0.984 |
CEP54_000144 | NCS6 | A0A428R8U4 | A0A428QB15 | Elongator complex protein 3; Catalytic tRNA acetyltransferase subunit of the RNA polymerase II elongator complex, which is a component of the RNA polymerase II (Pol II) holoenzyme and is involved in transcriptional elongation. | Cytoplasmic tRNA 2-thiolation protein 1; Plays a central role in 2-thiolation of mcm(5)S(2)U at tRNA wobble positions of tRNA(Lys), tRNA(Glu) and tRNA(Gln). Directly binds tRNAs and probably acts by catalyzing adenylation of tRNAs, an intermediate required for 2-thiolation. It is unclear whether it acts as a sulfurtransferase that transfers sulfur from thiocarboxylated URM1 onto the uridine of tRNAs at wobble position. Prior mcm(5) tRNA modification by the elongator complex is required for 2-thiolation. May also be involved in protein urmylation. | 0.786 |
CEP54_001475 | CEP54_000144 | A0A428R0D1 | A0A428R8U4 | Uncharacterized protein. | Elongator complex protein 3; Catalytic tRNA acetyltransferase subunit of the RNA polymerase II elongator complex, which is a component of the RNA polymerase II (Pol II) holoenzyme and is involved in transcriptional elongation. | 0.945 |
CEP54_001475 | CEP54_002050 | A0A428R0D1 | A0A428QXT4 | Uncharacterized protein. | Uncharacterized protein. | 0.780 |
CEP54_001475 | CEP54_002051 | A0A428R0D1 | A0A428QXL9 | Uncharacterized protein. | Uncharacterized protein. | 0.780 |
CEP54_001475 | CEP54_007714 | A0A428R0D1 | A0A428Q057 | Uncharacterized protein. | DPBB_1 domain-containing protein. | 0.629 |
CEP54_001475 | CEP54_007755 | A0A428R0D1 | A0A428PZN5 | Uncharacterized protein. | Uncharacterized protein. | 0.910 |
CEP54_001475 | NCS6 | A0A428R0D1 | A0A428QB15 | Uncharacterized protein. | Cytoplasmic tRNA 2-thiolation protein 1; Plays a central role in 2-thiolation of mcm(5)S(2)U at tRNA wobble positions of tRNA(Lys), tRNA(Glu) and tRNA(Gln). Directly binds tRNAs and probably acts by catalyzing adenylation of tRNAs, an intermediate required for 2-thiolation. It is unclear whether it acts as a sulfurtransferase that transfers sulfur from thiocarboxylated URM1 onto the uridine of tRNAs at wobble position. Prior mcm(5) tRNA modification by the elongator complex is required for 2-thiolation. May also be involved in protein urmylation. | 0.595 |
CEP54_002050 | CEP54_000144 | A0A428QXT4 | A0A428R8U4 | Uncharacterized protein. | Elongator complex protein 3; Catalytic tRNA acetyltransferase subunit of the RNA polymerase II elongator complex, which is a component of the RNA polymerase II (Pol II) holoenzyme and is involved in transcriptional elongation. | 0.972 |
CEP54_002050 | CEP54_001475 | A0A428QXT4 | A0A428R0D1 | Uncharacterized protein. | Uncharacterized protein. | 0.780 |
CEP54_002050 | CEP54_002051 | A0A428QXT4 | A0A428QXL9 | Uncharacterized protein. | Uncharacterized protein. | 0.963 |
CEP54_002050 | CEP54_007714 | A0A428QXT4 | A0A428Q057 | Uncharacterized protein. | DPBB_1 domain-containing protein. | 0.844 |
CEP54_002050 | CEP54_007755 | A0A428QXT4 | A0A428PZN5 | Uncharacterized protein. | Uncharacterized protein. | 0.964 |
CEP54_002050 | NCS6 | A0A428QXT4 | A0A428QB15 | Uncharacterized protein. | Cytoplasmic tRNA 2-thiolation protein 1; Plays a central role in 2-thiolation of mcm(5)S(2)U at tRNA wobble positions of tRNA(Lys), tRNA(Glu) and tRNA(Gln). Directly binds tRNAs and probably acts by catalyzing adenylation of tRNAs, an intermediate required for 2-thiolation. It is unclear whether it acts as a sulfurtransferase that transfers sulfur from thiocarboxylated URM1 onto the uridine of tRNAs at wobble position. Prior mcm(5) tRNA modification by the elongator complex is required for 2-thiolation. May also be involved in protein urmylation. | 0.635 |
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