STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CEP54_006038Uncharacterized protein. (405 aa)    
Predicted Functional Partners:
CEP54_006539
mRNA 3'-end-processing protein RNA14.
   
 0.954
CEP54_004377
Pre-mRNA polyadenylation factor FIP1.
    
 0.953
CEP54_003245
DUF3453 domain-containing protein.
   
 0.942
CEP54_011304
Endoribonuclease YSH1.
   
 0.935
CEP54_004678
Cleavage and polyadenylation specificity factor subunit 2.
    
 0.918
CEP54_005172
Cft1-like protein.
    
 0.914
CEP54_006316
Polyadenylation factor subunit 2.
    
 0.892
CEP54_002016
Uncharacterized protein.
    
 0.891
CEP54_011764
YTH domain-containing protein.
    
 0.873
CLP1
mRNA cleavage and polyadenylation factor CLP1; Required for endonucleolytic cleavage during polyadenylation- dependent pre-mRNA 3'-end formation.
   
 0.860
Your Current Organism:
Fusarium sp. AF8
NCBI taxonomy Id: 1325734
Other names: F. sp. AF-8, Fusarium sp. AF-8
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.