CEP52_011647 protein (Fusarium sp. AF4) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

CEP52_011647

Uncharacterized protein. (265 aa)

Predicted Functional Partners:

CEP52_004755

0.729

CEP52_016238

0.460

CEP52_011825

0.449

CEP52_010500

0.449

CEP52_007634

0.448

CEP52_015480

0.429

CEP52_012949

0.429

CEP52_012801

0.429

CEP52_012346

0.429

CEP52_012081

0.429

Your Current Organism:

Fusarium sp. AF4

NCBI taxonomy Id: 1325735
Other names: F. sp. AF-4, Fusarium sp. AF-4

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CEP52_004755	CEP52_010500	A0A428U1W5	A0A428T7X0	Tryptophan synthase.	Uncharacterized protein.	0.812
CEP52_004755	CEP52_011647	A0A428U1W5	A0A428T2A4	Tryptophan synthase.	Uncharacterized protein.	0.729
CEP52_004755	CEP52_011825	A0A428U1W5	A0A428T1R8	Tryptophan synthase.	Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria.	0.812
CEP52_007634	CEP52_011647	A0A428TLX5	A0A428T2A4	Terpene cyclase/mutase family member; Belongs to the terpene cyclase/mutase family.	Uncharacterized protein.	0.448
CEP52_010500	CEP52_004755	A0A428T7X0	A0A428U1W5	Uncharacterized protein.	Tryptophan synthase.	0.812
CEP52_010500	CEP52_011647	A0A428T7X0	A0A428T2A4	Uncharacterized protein.	Uncharacterized protein.	0.449
CEP52_010500	CEP52_011825	A0A428T7X0	A0A428T1R8	Uncharacterized protein.	Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria.	0.958
CEP52_010500	CEP52_016238	A0A428T7X0	A0A428S5Q3	Uncharacterized protein.	Cytochrome b5 heme-binding domain-containing protein; Belongs to the cytochrome b5 family.	0.948
CEP52_011647	CEP52_004755	A0A428T2A4	A0A428U1W5	Uncharacterized protein.	Tryptophan synthase.	0.729
CEP52_011647	CEP52_007634	A0A428T2A4	A0A428TLX5	Uncharacterized protein.	Terpene cyclase/mutase family member; Belongs to the terpene cyclase/mutase family.	0.448
CEP52_011647	CEP52_010500	A0A428T2A4	A0A428T7X0	Uncharacterized protein.	Uncharacterized protein.	0.449
CEP52_011647	CEP52_011825	A0A428T2A4	A0A428T1R8	Uncharacterized protein.	Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria.	0.449
CEP52_011647	CEP52_012081	A0A428T2A4	A0A428T0C7	Uncharacterized protein.	Uncharacterized protein.	0.429
CEP52_011647	CEP52_012346	A0A428T2A4	A0A428SYR2	Uncharacterized protein.	Uncharacterized protein.	0.429
CEP52_011647	CEP52_012801	A0A428T2A4	A0A428SWL8	Uncharacterized protein.	F-box domain-containing protein.	0.429
CEP52_011647	CEP52_012949	A0A428T2A4	A0A428SVR8	Uncharacterized protein.	Uncharacterized protein.	0.429
CEP52_011647	CEP52_015480	A0A428T2A4	A0A428SCR7	Uncharacterized protein.	Uncharacterized protein.	0.429
CEP52_011647	CEP52_016238	A0A428T2A4	A0A428S5Q3	Uncharacterized protein.	Cytochrome b5 heme-binding domain-containing protein; Belongs to the cytochrome b5 family.	0.460
CEP52_011825	CEP52_004755	A0A428T1R8	A0A428U1W5	Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria.	Tryptophan synthase.	0.812
CEP52_011825	CEP52_010500	A0A428T1R8	A0A428T7X0	Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria.	Uncharacterized protein.	0.958