STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CEP52_009854Protein kinase domain-containing protein. (714 aa)    
Predicted Functional Partners:
CEP52_002680
Transcription elongation factor SPT5; The SPT4-SPT5 complex mediates both activation and inhibition of transcription elongation, and plays a role in pre-mRNA processing. This complex seems to be important for the stability of the RNA polymerase II elongation machinery on the chromatin template but not for the inherent ability of this machinery to translocate down the gene.
    
 0.901
CEP52_011970
Cyclin N-terminal domain-containing protein.
    
 0.880
CEP52_011799
Uncharacterized protein.
    
 0.880
CEP52_001677
CYCLIN domain-containing protein; Belongs to the cyclin family.
    
 0.880
CEP52_014551
Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.
    
 0.804
CEP52_003192
Transcription elongation factor SPT4; The SPT4-SPT5 complex mediates both activation and inhibition of transcription elongation, and plays a role in pre-mRNA processing. This complex seems to be important for the stability of the RNA polymerase II elongation machinery on the chromatin template but not for the inherent ability of this machinery to translocate down the gene.
    
 0.787
CEP52_003334
Uncharacterized protein.
   
 0.771
CEP52_003757
Cyclin_C_2 domain-containing protein.
    
 0.754
CEP52_007818
FACT complex subunit SPT16.
    
 0.742
CEP52_008148
RPOLD domain-containing protein.
    
 0.741
Your Current Organism:
Fusarium sp. AF4
NCBI taxonomy Id: 1325735
Other names: F. sp. AF-4, Fusarium sp. AF-4
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