CEP53_004802 protein (Fusarium sp. AF6) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

CEP53_004802

Uncharacterized protein. (282 aa)

Predicted Functional Partners:

CEP53_012439

0.542

CEP53_006142

0.523

CEP53_014399

0.507

CEP53_013536

0.500

CEP53_014779

0.492

CEP53_006585

0.484

CEP53_010468

0.481

CEP53_006140

0.481

CEP53_015210

0.455

CEP53_001316

0.455

Your Current Organism:

Fusarium sp. AF6

NCBI taxonomy Id: 1325737
Other names: F. sp. AF-6, Fusarium sp. AF-6

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CEP53_001316	CEP53_004802	A0A428R2K7	A0A428QAF3	Acyl-CoA desaturase; Stearyl-CoA desaturase that utilizes O(2) and electrons from reduced cytochrome b5 to introduce the first double bond into saturated fatty acyl-CoA substrates.	Uncharacterized protein.	0.455
CEP53_001316	CEP53_006142	A0A428R2K7	A0A428PZI6	Acyl-CoA desaturase; Stearyl-CoA desaturase that utilizes O(2) and electrons from reduced cytochrome b5 to introduce the first double bond into saturated fatty acyl-CoA substrates.	3-oxoacyl-[acyl-carrier-protein] synthase; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.	0.446
CEP53_001316	CEP53_006585	A0A428R2K7	A0A428PVT4	Acyl-CoA desaturase; Stearyl-CoA desaturase that utilizes O(2) and electrons from reduced cytochrome b5 to introduce the first double bond into saturated fatty acyl-CoA substrates.	Uncharacterized protein; Belongs to the thiolase-like superfamily. Thiolase family.	0.545
CEP53_001316	CEP53_015210	A0A428R2K7	A0A428NBA4	Acyl-CoA desaturase; Stearyl-CoA desaturase that utilizes O(2) and electrons from reduced cytochrome b5 to introduce the first double bond into saturated fatty acyl-CoA substrates.	Acyl-CoA desaturase; Stearyl-CoA desaturase that utilizes O(2) and electrons from reduced cytochrome b5 to introduce the first double bond into saturated fatty acyl-CoA substrates.	0.844
CEP53_004802	CEP53_001316	A0A428QAF3	A0A428R2K7	Uncharacterized protein.	Acyl-CoA desaturase; Stearyl-CoA desaturase that utilizes O(2) and electrons from reduced cytochrome b5 to introduce the first double bond into saturated fatty acyl-CoA substrates.	0.455
CEP53_004802	CEP53_006140	A0A428QAF3	A0A428PZH8	Uncharacterized protein.	DHFR domain-containing protein; Belongs to the dihydrofolate reductase family.	0.481
CEP53_004802	CEP53_006142	A0A428QAF3	A0A428PZI6	Uncharacterized protein.	3-oxoacyl-[acyl-carrier-protein] synthase; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.	0.523
CEP53_004802	CEP53_006585	A0A428QAF3	A0A428PVT4	Uncharacterized protein.	Uncharacterized protein; Belongs to the thiolase-like superfamily. Thiolase family.	0.484
CEP53_004802	CEP53_010468	A0A428QAF3	A0A428NZK7	Uncharacterized protein.	FSH1 domain-containing protein.	0.481
CEP53_004802	CEP53_012439	A0A428QAF3	A0A428NMK3	Uncharacterized protein.	TPR_REGION domain-containing protein.	0.542
CEP53_004802	CEP53_013536	A0A428QAF3	A0A428NHF8	Uncharacterized protein.	Pex2_Pex12 domain-containing protein.	0.500
CEP53_004802	CEP53_014399	A0A428QAF3	A0A428NDY5	Uncharacterized protein.	PKS_AT domain-containing protein.	0.507
CEP53_004802	CEP53_014779	A0A428QAF3	A0A428NCR0	Uncharacterized protein.	Pex14_N domain-containing protein.	0.492
CEP53_004802	CEP53_015210	A0A428QAF3	A0A428NBA4	Uncharacterized protein.	Acyl-CoA desaturase; Stearyl-CoA desaturase that utilizes O(2) and electrons from reduced cytochrome b5 to introduce the first double bond into saturated fatty acyl-CoA substrates.	0.455
CEP53_006140	CEP53_004802	A0A428PZH8	A0A428QAF3	DHFR domain-containing protein; Belongs to the dihydrofolate reductase family.	Uncharacterized protein.	0.481
CEP53_006140	CEP53_010468	A0A428PZH8	A0A428NZK7	DHFR domain-containing protein; Belongs to the dihydrofolate reductase family.	FSH1 domain-containing protein.	0.818
CEP53_006142	CEP53_001316	A0A428PZI6	A0A428R2K7	3-oxoacyl-[acyl-carrier-protein] synthase; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.	Acyl-CoA desaturase; Stearyl-CoA desaturase that utilizes O(2) and electrons from reduced cytochrome b5 to introduce the first double bond into saturated fatty acyl-CoA substrates.	0.446
CEP53_006142	CEP53_004802	A0A428PZI6	A0A428QAF3	3-oxoacyl-[acyl-carrier-protein] synthase; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.	Uncharacterized protein.	0.523
CEP53_006142	CEP53_006585	A0A428PZI6	A0A428PVT4	3-oxoacyl-[acyl-carrier-protein] synthase; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.	Uncharacterized protein; Belongs to the thiolase-like superfamily. Thiolase family.	0.602
CEP53_006142	CEP53_014399	A0A428PZI6	A0A428NDY5	3-oxoacyl-[acyl-carrier-protein] synthase; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.	PKS_AT domain-containing protein.	0.995