STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RIDAReactive intermediate imine deaminase A homolog. (139 aa)    
Predicted Functional Partners:
CNOT9
CCR4-NOT transcription complex subunit 9.
    
 0.914
CNOT4
CCR4-NOT transcription complex subunit 4.
    
 0.913
CNOT1
CCR4-NOT transcription complex subunit 1.
    
 0.910
BCAT1
Branched chain amino acid transaminase 1.
    
 0.890
SDSL
Serine dehydratase like.
  
 0.867
ENSABRP00000002086
annotation not available
  
 0.854
ENSABRP00000012762
annotation not available
  
 0.849
UGCG
UDP-glucose ceramide glucosyltransferase.
  
 0.849
ISOC1
Isochorismatase domain containing 1.
  
 
 0.839
EEF2
Eukaryotic translation elongation factor 2.
   
 0.832
Your Current Organism:
Anser brachyrhynchus
NCBI taxonomy Id: 132585
Other names: A. brachyrhynchus, Pink-footed goose
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.