STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LIG3DNA ligase 3. (1001 aa)    
Predicted Functional Partners:
ENSABRP00000001191
annotation not available
   
 0.995
PCNA
Proliferating cell nuclear antigen.
   
 0.982
XRCC6
X-ray repair cross complementing 6.
   
 0.974
XRCC5
X-ray repair cross complementing 5.
   
 0.973
POLB
DNA polymerase beta.
  
 0.955
TP53BP1
Tumor protein p53 binding protein 1.
   
 0.934
REC114
REC114 meiotic recombination protein.
   
 0.923
FEN1
Flap structure-specific endonuclease 1.
  
 0.914
ATM
ATM serine/threonine kinase.
    
 0.886
FAAP24
FA core complex associated protein 24.
     
 0.859
Your Current Organism:
Anser brachyrhynchus
NCBI taxonomy Id: 132585
Other names: A. brachyrhynchus, Pink-footed goose
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.