ENSABRP00000007688 protein (Anser brachyrhynchus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

ENSABRP00000007688

annotation not available (170 aa)

Predicted Functional Partners:

ENSABRP00000009849

0.963

ENSABRP00000009843

0.943

CCR7

0.912

CXCR4

0.907

ENSABRP00000007192

0.893

ENSABRP00000007705

0.893

IRF6

0.891

ENSABRP00000018897

0.889

ENSABRP00000007700

0.888

ENSABRP00000014349

0.884

Your Current Organism:

Anser brachyrhynchus

NCBI taxonomy Id: 132585
Other names: A. brachyrhynchus, Pink-footed goose

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CCR7	CXCR4	ENSABRP00000018886	ENSABRP00000008124	C-C motif chemokine receptor 7.	C-X-C motif chemokine receptor 4.	0.806
CCR7	ENSABRP00000007688	ENSABRP00000018886	ENSABRP00000007688	C-C motif chemokine receptor 7.	annotation not available	0.912
CCR7	ENSABRP00000007700	ENSABRP00000018886	ENSABRP00000007700	C-C motif chemokine receptor 7.	annotation not available	0.731
CCR7	ENSABRP00000007705	ENSABRP00000018886	ENSABRP00000007705	C-C motif chemokine receptor 7.	annotation not available	0.530
CCR7	ENSABRP00000009843	ENSABRP00000018886	ENSABRP00000009843	C-C motif chemokine receptor 7.	annotation not available	0.651
CCR7	ENSABRP00000009849	ENSABRP00000018886	ENSABRP00000009849	C-C motif chemokine receptor 7.	annotation not available	0.651
CCR7	ENSABRP00000014349	ENSABRP00000018886	ENSABRP00000014349	C-C motif chemokine receptor 7.	annotation not available	0.665
CCR7	ENSABRP00000018897	ENSABRP00000018886	ENSABRP00000018897	C-C motif chemokine receptor 7.	annotation not available	0.720
CXCR4	CCR7	ENSABRP00000008124	ENSABRP00000018886	C-X-C motif chemokine receptor 4.	C-C motif chemokine receptor 7.	0.806
CXCR4	ENSABRP00000007688	ENSABRP00000008124	ENSABRP00000007688	C-X-C motif chemokine receptor 4.	annotation not available	0.907
CXCR4	ENSABRP00000007700	ENSABRP00000008124	ENSABRP00000007700	C-X-C motif chemokine receptor 4.	annotation not available	0.723
CXCR4	ENSABRP00000007705	ENSABRP00000008124	ENSABRP00000007705	C-X-C motif chemokine receptor 4.	annotation not available	0.688
CXCR4	ENSABRP00000009843	ENSABRP00000008124	ENSABRP00000009843	C-X-C motif chemokine receptor 4.	annotation not available	0.943
CXCR4	ENSABRP00000009849	ENSABRP00000008124	ENSABRP00000009849	C-X-C motif chemokine receptor 4.	annotation not available	0.823
CXCR4	ENSABRP00000014349	ENSABRP00000008124	ENSABRP00000014349	C-X-C motif chemokine receptor 4.	annotation not available	0.953
CXCR4	ENSABRP00000018897	ENSABRP00000008124	ENSABRP00000018897	C-X-C motif chemokine receptor 4.	annotation not available	0.796
ENSABRP00000007192	ENSABRP00000007688	ENSABRP00000007192	ENSABRP00000007688	annotation not available	annotation not available	0.893
ENSABRP00000007688	CCR7	ENSABRP00000007688	ENSABRP00000018886	annotation not available	C-C motif chemokine receptor 7.	0.912
ENSABRP00000007688	CXCR4	ENSABRP00000007688	ENSABRP00000008124	annotation not available	C-X-C motif chemokine receptor 4.	0.907
ENSABRP00000007688	ENSABRP00000007192	ENSABRP00000007688	ENSABRP00000007192	annotation not available	annotation not available	0.893