STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MARCHF8Membrane associated ring-CH-type finger 8. (568 aa)    
Predicted Functional Partners:
CNOT2
CCR4-NOT transcription complex subunit 2.
    
 0.720
UBR1
Ubiquitin protein ligase E3 component n-recognin 1.
    
 
 0.702
MARCHF5
Membrane associated ring-CH-type finger 5.
      
 0.627
FAF1
Fas associated factor 1.
    
 0.617
FAF2
Fas associated factor family member 2.
    
 0.617
FBXL20
F-box and leucine rich repeat protein 20.
      
 0.603
SPATA5
Spermatogenesis associated 5.
    
 0.588
VCP
Valosin containing protein.
    
 0.588
SPATA5L1
Spermatogenesis associated 5 like 1.
    
 0.588
UFD1
Ubiquitin recognition factor in ER associated degradation 1.
    
 0.578
Your Current Organism:
Anser brachyrhynchus
NCBI taxonomy Id: 132585
Other names: A. brachyrhynchus, Pink-footed goose
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.