STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MICAL1Microtubule associated monooxygenase, calponin and LIM domain containing 1. (1132 aa)    
Predicted Functional Partners:
EHBP1
EH domain binding protein 1.
   
0.786
RAB10
RAB10, member RAS oncogene family.
   
 
 0.595
RAB8B
RAB8B, member RAS oncogene family.
   
 
 0.566
ENSABRP00000004926
annotation not available
   
 
 0.550
RAB15
RAB15, member RAS oncogene family.
   
 
 0.550
RAB8A
RAB8A, member RAS oncogene family.
   
 
 0.550
ENSABRP00000018329
annotation not available
   
 
 0.548
PDLIM4
PDZ and LIM domain 4.
     
 0.538
PDLIM2
PDZ and LIM domain 2.
     
 0.538
STK3
Serine/threonine kinase 3.
    
  0.530
Your Current Organism:
Anser brachyrhynchus
NCBI taxonomy Id: 132585
Other names: A. brachyrhynchus, Pink-footed goose
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