STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TSPAN18Tetraspanin 18. (247 aa)    
Predicted Functional Partners:
CDH6
Cadherin 6.
     
 0.624
MET
MET proto-oncogene, receptor tyrosine kinase.
    
  0.623
ENSABRP00000023481
annotation not available
    
  0.623
ENSABRP00000023495
annotation not available
    
  0.623
CD82
CD82 molecule.
     
0.595
KIT
KIT proto-oncogene, receptor tyrosine kinase.
    
 0.452
ADAM10
ADAM metallopeptidase domain 10.
    
 0.437
PDGFB
Platelet derived growth factor subunit B.
    
  0.425
IL7R
Interleukin 7 receptor.
   
 
 0.421
ENSABRP00000015366
annotation not available
   
 
  0.420
Your Current Organism:
Anser brachyrhynchus
NCBI taxonomy Id: 132585
Other names: A. brachyrhynchus, Pink-footed goose
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.