STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TLNRD1Talin rod domain containing 1. (355 aa)    
Predicted Functional Partners:
VCL
Vinculin.
   
 0.954
APBB1IP
Amyloid beta precursor protein binding family B member 1 interacting protein.
    
 0.892
ENSABRP00000010041
annotation not available
   
 0.844
PIP5K1C
Phosphatidylinositol-4-phosphate 5-kinase type 1 gamma.
    
 0.816
PIP5K1A
Phosphatidylinositol-4-phosphate 5-kinase type 1 alpha.
    
 0.816
ITGB4
Integrin subunit beta 4.
   
 0.814
ITGB6
Integrin subunit beta 6.
   
 0.811
ITGB8
Integrin subunit beta 8.
    
 0.810
ITGB5
Integrin subunit beta 5.
   
 0.798
RAPH1
Ras association (RalGDS/AF-6) and pleckstrin homology domains 1.
    
 0.796
Your Current Organism:
Anser brachyrhynchus
NCBI taxonomy Id: 132585
Other names: A. brachyrhynchus, Pink-footed goose
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.