STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000820705_00710Unannotated protein. (321 aa)    
Predicted Functional Partners:
GCA_000820705_00709
Unannotated protein.
 
     0.895
GCA_000820705_00711
Unannotated protein.
       0.601
GCA_000820705_01911
Unannotated protein.
  
     0.598
GCA_000820705_00708
Unannotated protein.
 
     0.522
GCA_000820705_02567
Unannotated protein.
  
    0.498
GCA_000820705_02065
Unannotated protein.
  
     0.488
GCA_000820705_02777
Unannotated protein.
  
     0.480
GCA_000820705_02889
Unannotated protein.
  
     0.467
GCA_000820705_01927
Unannotated protein.
  
     0.451
GCA_000820705_00797
Unannotated protein.
  
     0.450
Your Current Organism:
Clostridium polynesiense
NCBI taxonomy Id: 1325933
Other names: C. polynesiense, CSUR P630, Clostridium sp. MS1, DSM 27072, strain MS1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.