Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
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Co-occurrence
Co-expression
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Textmining
[Homology]
Score
BU200_08085Hypothetical protein; Internal stop; incomplete; missing stop; Derived by automated computational analysis using gene prediction method: Protein Homology. (277 aa)    
Predicted Functional Partners:
OLF49885.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.986
OLF49285.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.867
OLF49284.1
GDSL family lipase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.857
hupB
DNA-binding protein; Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions.
     
 0.722
OLF50397.1
Superoxide dismutase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   
 0.667
OLF49857.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.642
OLF50769.1
Multidrug ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.627
Your Current Organism:
Streptococcus acidominimus
NCBI taxonomy Id: 1326
Other names: ATCC 51725, CCUG 27296, CIP 82.4, DSM 20622, LMG 17755, LMG:17755, NCDO 2025, NCIMB 702025, NCTC 12957, S. acidominimus
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