STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSPSMP00000009863annotation not available (178 aa)    
Predicted Functional Partners:
SNRPF
Small nuclear ribonucleoprotein polypeptide F.
   
 0.990
SNRPD3
Small nuclear ribonucleoprotein D3 polypeptide.
   
 0.989
SNRPD1
Small nuclear ribonucleoprotein D1 polypeptide.
   
 0.984
ENSPSMP00000029359
annotation not available
   
 0.983
ENSPSMP00000036028
annotation not available
   
 0.983
SF3B5
Splicing factor 3b subunit 5.
   
 0.981
SNRNP70
Small nuclear ribonucleoprotein U1 subunit 70.
   
 0.978
SF3B1
Splicing factor 3b subunit 1.
   
 0.978
SNRPA
Small nuclear ribonucleoprotein polypeptide A.
   
 0.977
SF3A3
Splicing factor 3a subunit 3.
   
 0.975
Your Current Organism:
Prolemur simus
NCBI taxonomy Id: 1328070
Other names: Hapalemur simus, P. simus, broad-nosed bamboo lemur, greater bamboo lemur
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.