STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
asnBAsparagine synthetase B; COG0367 Asparagine synthase (glutamine-hydrolyzing). (556 aa)    
Predicted Functional Partners:
thrA
Bifunctional aspartokinase I/homoserine dehydrogenase I; COG0527 Aspartokinases; In the C-terminal section; belongs to the homoserine dehydrogenase family.
 
 
 0.969
gltB
COG0067 Glutamate synthase domain 1.
  
 
 0.920
DS2_10047
Aspartate kinase III; COG0527 Aspartokinases; Belongs to the aspartokinase family.
  
 
 0.915
DS2_17387
COG0540 Aspartate carbamoyltransferase, catalytic chain; Belongs to the aspartate/ornithine carbamoyltransferase superfamily.
    
 0.907
argG
COG0137 Argininosuccinate synthase; Belongs to the argininosuccinate synthase family. Type 1 subfamily.
    
 0.906
purA
Adenylosuccinate synthetase; Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP; Belongs to the adenylosuccinate synthetase family.
  
 
 0.903
DS2_11763
COG1448 Aspartate/tyrosine/aromatic aminotransferase.
     
 0.902
DS2_08585
COG0076 Glutamate decarboxylase and related PLP-dependent proteins.
     
 0.896
DS2_12428
COG0367 Asparagine synthase (glutamine-hydrolyzing).
  
  
 
0.772
DS2_12453
COG0367 Asparagine synthase (glutamine-hydrolyzing).
  
  
 
0.771
Your Current Organism:
Catenovulum agarivorans DS2
NCBI taxonomy Id: 1328313
Other names: C. agarivorans DS-2, Catenovulum agarivorans DS-2
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