STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A165FE50RBR-type E3 ubiquitin transferase. (386 aa)    
Predicted Functional Partners:
A0A164ZKS3
Ubiquitin.
    
 0.816
A0A165AJB4
Ubiquitin-like domain-containing protein.
    
 0.816
A0A165GA07
Ubiquitin/40S ribosomal protein S27a fusion.
    
 0.815
A0A165JME5
BZIP domain-containing protein.
    
 0.815
A0A165HFM2
RRN7-type domain-containing protein.
    
  0.809
A0A165HIF4
Ubiquitin-like protein.
    
  0.809
A0A165FT72
Putative E3 ubiquitin-protein ligase RBX1.
    
 0.802
A0A165I895
Putative NEDD8-like protein.
    
 0.802
A0A165AG84
RING-type domain-containing protein.
    
 0.790
A0A165FNC4
RBR-type E3 ubiquitin transferase.
    
0.790
Your Current Organism:
Xylona heveae
NCBI taxonomy Id: 1328760
Other names: X. heveae TC161, Xylona heveae TC161
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.