Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
A0A164ZC22 | A0A164ZKS3 | Putative OTU-like cysteine protease. | Ubiquitin. | 0.950 |
A0A164ZC22 | A0A164ZYX6 | Putative OTU-like cysteine protease. | UBX-domain-containing protein. | 0.505 |
A0A164ZC22 | A0A165AC18 | Putative OTU-like cysteine protease. | P-loop containing nucleoside triphosphate hydrolase protein. | 0.964 |
A0A164ZC22 | A0A165AIW3 | Putative OTU-like cysteine protease. | UFD1-domain-containing protein. | 0.973 |
A0A164ZC22 | A0A165AJB4 | Putative OTU-like cysteine protease. | Ubiquitin-like domain-containing protein. | 0.874 |
A0A164ZC22 | A0A165F9T1 | Putative OTU-like cysteine protease. | ANK_REP_REGION domain-containing protein. | 0.878 |
A0A164ZC22 | A0A165FNT7 | Putative OTU-like cysteine protease. | AAA-domain-containing protein. | 0.933 |
A0A164ZC22 | A0A165H6Y2 | Putative OTU-like cysteine protease. | PFU-domain-containing protein. | 0.972 |
A0A164ZC22 | A0A165J9H3 | Putative OTU-like cysteine protease. | Nuclear protein localization protein 4. | 0.968 |
A0A164ZC22 | A0A165K3U4 | Putative OTU-like cysteine protease. | Cell division control protein Cdc48; Belongs to the AAA ATPase family. | 0.964 |
A0A164ZKS3 | A0A164ZC22 | Ubiquitin. | Putative OTU-like cysteine protease. | 0.950 |
A0A164ZKS3 | A0A164ZYX6 | Ubiquitin. | UBX-domain-containing protein. | 0.537 |
A0A164ZKS3 | A0A165AC18 | Ubiquitin. | P-loop containing nucleoside triphosphate hydrolase protein. | 0.956 |
A0A164ZKS3 | A0A165AIW3 | Ubiquitin. | UFD1-domain-containing protein. | 0.969 |
A0A164ZKS3 | A0A165FNT7 | Ubiquitin. | AAA-domain-containing protein. | 0.922 |
A0A164ZKS3 | A0A165H6Y2 | Ubiquitin. | PFU-domain-containing protein. | 0.943 |
A0A164ZKS3 | A0A165J9H3 | Ubiquitin. | Nuclear protein localization protein 4. | 0.985 |
A0A164ZKS3 | A0A165K3U4 | Ubiquitin. | Cell division control protein Cdc48; Belongs to the AAA ATPase family. | 0.956 |
A0A164ZYX6 | A0A164ZC22 | UBX-domain-containing protein. | Putative OTU-like cysteine protease. | 0.505 |
A0A164ZYX6 | A0A164ZKS3 | UBX-domain-containing protein. | Ubiquitin. | 0.537 |
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