STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBDC1Polysaccharide biosynthesis domain containing 1. (204 aa)    
Predicted Functional Partners:
IMPA2
Inositol monophosphatase 2.
      
 0.769
MYSM1
Myb like, SWIRM and MPN domains 1.
   
 
 0.721
LRRC42
Leucine rich repeat containing 42.
      
 0.693
MPLKIP
M-phase specific PLK1 interacting protein.
      
 0.668
TTLL12
Tubulin tyrosine ligase like 12.
    
   0.657
ENSPVAP00000011788
annotation not available
   
    0.651
ZDHHC24
Zinc finger DHHC-type containing 24.
      
 0.645
ENSPVAP00000007255
annotation not available
    
   0.596
EEF1A2
Eukaryotic translation elongation factor 1 alpha 2.
    
   0.596
LSM14B
LSM family member 14B.
      
 0.572
Your Current Organism:
Pteropus vampyrus
NCBI taxonomy Id: 132908
Other names: P. vampyrus, large flying fox
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.