STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TENT5ATerminal nucleotidyltransferase 5A. (513 aa)    
Predicted Functional Partners:
FAM162B
Family with sequence similarity 162 member B.
      
 0.796
ENSPVAP00000014152
annotation not available
      
 0.769
BCCIP
BRCA2 and CDKN1A interacting protein.
    
 
 0.754
GPR153
G protein-coupled receptor 153.
   
  
 0.714
WDR7
WD repeat domain 7.
      
 0.712
YPEL5
Yippee like 5.
      
 0.699
PLK4
Polo like kinase 4.
    
 
 0.670
MTMR11
Myotubularin related protein 11.
      
 0.655
SCFD1
Sec1 family domain containing 1.
      
 0.644
MTO1
Mitochondrial tRNA translation optimization 1.
    
 
 0.639
Your Current Organism:
Pteropus vampyrus
NCBI taxonomy Id: 132908
Other names: P. vampyrus, large flying fox
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.