STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CHRNECholinergic receptor nicotinic epsilon subunit. (492 aa)    
Predicted Functional Partners:
CHRNA1
Cholinergic receptor nicotinic alpha 1 subunit.
   
0.856
RAPSN
Receptor associated protein of the synapse.
   
 
 0.766
CHRNA4
Cholinergic receptor nicotinic alpha 4 subunit.
    
0.756
CHRNA2
Cholinergic receptor nicotinic alpha 2 subunit.
  
 
0.751
CHRNA5
Cholinergic receptor nicotinic alpha 5 subunit.
    
0.731
CHRNB3
Cholinergic receptor nicotinic beta 3 subunit.
  
0.729
ENSPVAP00000016788
annotation not available
 
 
0.711
COLQ
Collagen like tail subunit of asymmetric acetylcholinesterase.
    
 
 0.650
ALG14
ALG14 UDP-N-acetylglucosaminyltransferase subunit.
      
 0.636
MYO9A
Myosin IXA.
      
 0.634
Your Current Organism:
Pteropus vampyrus
NCBI taxonomy Id: 132908
Other names: P. vampyrus, large flying fox
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.