STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UBA3Ubiquitin like modifier activating enzyme 3. (419 aa)    
Predicted Functional Partners:
NAE1
NEDD8 activating enzyme E1 subunit 1.
   
 0.999
NEDD8
NEDD8 ubiquitin like modifier.
    
 0.998
UBE2M
Ubiquitin conjugating enzyme E2 M.
    
 0.994
ENSPVAP00000015982
annotation not available
    
 0.986
TMEM189-UBE2V1
TMEM189-UBE2V1 readthrough.
   
 
 0.955
BIRC6
Baculoviral IAP repeat containing 6.
  
 0.948
TRIP12
Thyroid hormone receptor interactor 12.
    
 0.948
RBX1
Ring-box 1.
    
 0.927
CUL3
Cullin 3.
   
 0.923
DCUN1D5
Defective in cullin neddylation 1 domain containing 5.
   
 0.910
Your Current Organism:
Pteropus vampyrus
NCBI taxonomy Id: 132908
Other names: P. vampyrus, large flying fox
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.