STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSPVAP00000001029annotation not available (160 aa)    
Predicted Functional Partners:
CPSF3
Cleavage and polyadenylation specific factor 3.
   
 0.938
WDR82
WD repeat domain 82.
   
 0.938
CPSF2
Cleavage and polyadenylation specific factor 2.
   
 0.936
CPSF1
Cleavage and polyadenylation specific factor 1.
    
 0.934
WDR33
WD repeat domain 33.
    
 0.931
ENSPVAP00000000679
annotation not available
    
 0.929
RBBP6
RB binding protein 6, ubiquitin ligase.
    
 0.925
ENSPVAP00000004796
annotation not available
    
 0.921
SYMPK
Symplekin.
   
 
 0.872
GTF2B
General transcription factor IIB.
   
 0.870
Your Current Organism:
Pteropus vampyrus
NCBI taxonomy Id: 132908
Other names: P. vampyrus, large flying fox
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.