STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H2AZ2H2A.Z variant histone 2. (128 aa)    
Predicted Functional Partners:
RUVBL1
RuvB like AAA ATPase 1.
   
 0.935
HDAC3
Histone deacetylase 3.
   
 0.931
ENSPVAP00000007827
annotation not available
   
 0.928
VPS72
Vacuolar protein sorting 72 homolog.
    
 
 0.912
HDAC10
Histone deacetylase 10.
    
 0.909
HDAC11
Histone deacetylase 11.
    
 0.909
HDAC6
Histone deacetylase 6.
    
 0.909
HDAC4
Histone deacetylase 4.
    
 0.909
HDAC5
Histone deacetylase 5.
    
 0.909
ARID4A
AT-rich interaction domain 4A.
   
 0.907
Your Current Organism:
Pteropus vampyrus
NCBI taxonomy Id: 132908
Other names: P. vampyrus, large flying fox
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.