STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CSDC2Cold shock domain containing C2. (153 aa)    
Predicted Functional Partners:
PRSS53
Serine protease 53.
      
 0.756
PARM1
Prostate androgen-regulated mucin-like protein 1.
    
 0.690
SNRPF
Small nuclear ribonucleoprotein polypeptide F.
    
  0.687
SNRPG
Small nuclear ribonucleoprotein polypeptide G.
    
  0.674
SNRPD3
Small nuclear ribonucleoprotein D3 polypeptide.
   
 0.673
AKNAD1
AKNA domain containing 1.
   
 
 0.661
NCBP2
Nuclear cap binding protein subunit 2.
   
  0.657
KRT23
Keratin 23.
      
 0.645
ENSPVAP00000001964
annotation not available
   
 0.637
ENSPVAP00000000721
annotation not available
    
 0.630
Your Current Organism:
Pteropus vampyrus
NCBI taxonomy Id: 132908
Other names: P. vampyrus, large flying fox
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.