STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TCF20Transcription factor 20. (1961 aa)    
Predicted Functional Partners:
TNRC6C
Trinucleotide repeat containing adaptor 6C.
  
 
 0.843
ASH2L
ASH2 like, histone lysine methyltransferase complex subunit.
    
 0.802
RBBP5
RB binding protein 5, histone lysine methyltransferase complex subunit.
    
 0.800
EED
Embryonic ectoderm development.
   
 0.788
SUZ12
SUZ12 polycomb repressive complex 2 subunit.
   
 0.768
BTAF1
B-TFIID TATA-box binding protein associated factor 1.
    
 
 0.743
UBTF
Upstream binding transcription factor.
   
 0.743
ENSPVAP00000004763
annotation not available
    
 0.741
ENSPVAP00000015532
annotation not available
    
 0.741
KDM6A
Lysine demethylase 6A.
   
 0.700
Your Current Organism:
Pteropus vampyrus
NCBI taxonomy Id: 132908
Other names: P. vampyrus, large flying fox
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.