STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ESF1ESF1 nucleolar pre-rRNA processing protein homolog. (849 aa)    
Predicted Functional Partners:
DDX10
DEAD-box helicase 10.
   
 
 0.998
UTP3
UTP3 small subunit processome component.
   
 
 0.997
UTP6
UTP6 small subunit processome component.
   
 
 0.996
UTP18
UTP18 small subunit processome component.
   
 
 0.995
NOL6
Nucleolar protein 6.
   
 
 0.993
DDX47
DEAD-box helicase 47.
   
 
 0.991
NAT10
N-acetyltransferase 10.
   
 
 0.989
MPHOSPH10
M-phase phosphoprotein 10.
   
 
 0.985
NOM1
Nucleolar protein with MIF4G domain 1.
   
   0.981
ABT1
Activator of basal transcription 1.
   
 
 0.980
Your Current Organism:
Pteropus vampyrus
NCBI taxonomy Id: 132908
Other names: P. vampyrus, large flying fox
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.