STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TIGD6Tigger transposable element derived 6. (524 aa)    
Predicted Functional Partners:
UBE2I
Ubiquitin conjugating enzyme E2 I.
    
  0.783
KCTD2
Potassium channel tetramerization domain containing 2.
    
  0.716
NAIF1
Nuclear apoptosis inducing factor 1.
   
  
 0.655
PDE6A
Phosphodiesterase 6A.
      
 0.581
ENSPVAP00000009790
annotation not available
      
 0.562
PDE6C
Phosphodiesterase 6C.
      
 0.562
ERCC6
ERCC excision repair 6, chromatin remodeling factor.
    
  0.524
SLC26A2
Solute carrier family 26 member 2.
      
 0.519
PDE10A
Phosphodiesterase 10A.
      
 0.512
PDE5A
Phosphodiesterase 5A.
      
 0.512
Your Current Organism:
Pteropus vampyrus
NCBI taxonomy Id: 132908
Other names: P. vampyrus, large flying fox
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.