STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSPVAP00000001290annotation not available (406 aa)    
Predicted Functional Partners:
CLN6
CLN6 transmembrane ER protein.
  
   
 0.843
ENSPVAP00000001133
annotation not available
    
 
 0.831
ENSPVAP00000006125
annotation not available
      
 0.774
MFSD8
Major facilitator superfamily domain containing 8.
      
 0.770
TPP1
Tripeptidyl peptidase 1.
      
 0.769
ENSPVAP00000010073
annotation not available
      
 0.769
PPT1
Palmitoyl-protein thioesterase 1.
      
 0.769
ARSG
Arylsulfatase G.
    
 
 0.705
CTSF
Cathepsin F.
      
 0.693
ENSPVAP00000003434
annotation not available
    
 
 0.689
Your Current Organism:
Pteropus vampyrus
NCBI taxonomy Id: 132908
Other names: P. vampyrus, large flying fox
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.