STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UFM1Ubiquitin fold modifier 1. (98 aa)    
Predicted Functional Partners:
UBA5
Ubiquitin like modifier activating enzyme 5.
    
 
 0.986
UFSP2
UFM1 specific peptidase 2.
    
 
 0.972
UFSP1
UFM1 specific peptidase 1 (inactive).
  
 
 
 0.963
UFC1
Ubiquitin-fold modifier conjugating enzyme 1.
  
 
 0.961
UFL1
UFM1 specific ligase 1.
   
 
 0.863
DDRGK1
DDRGK domain containing 1.
    
 
 0.807
ZNF76
Zinc finger protein 76.
      
 0.800
ENSPVAP00000010751
annotation not available
    
 
 0.782
ENSPVAP00000015083
annotation not available
      
 0.780
TTC7B
Tetratricopeptide repeat domain 7B.
      
 0.777
Your Current Organism:
Pteropus vampyrus
NCBI taxonomy Id: 132908
Other names: P. vampyrus, large flying fox
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