STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LRRC69Leucine rich repeat containing 69. (191 aa)    
Predicted Functional Partners:
OTUB2
OTU deubiquitinase, ubiquitin aldehyde binding 2.
    
 
 0.673
OTUB1
OTU deubiquitinase, ubiquitin aldehyde binding 1.
    
 
 0.603
OTUD5
OTU deubiquitinase 5.
      
 0.575
USP45
Ubiquitin specific peptidase 45.
   
  
 0.567
TRIP12
Thyroid hormone receptor interactor 12.
      
 0.548
STK39
Serine/threonine kinase 39.
      
 0.546
MYSM1
Myb like, SWIRM and MPN domains 1.
    
 
 0.535
PDHX
Pyruvate dehydrogenase complex component X.
   
  
 0.519
VCPIP1
Valosin containing protein interacting protein 1.
      
 0.511
OTUD3
OTU deubiquitinase 3.
      
 0.507
Your Current Organism:
Pteropus vampyrus
NCBI taxonomy Id: 132908
Other names: P. vampyrus, large flying fox
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.