Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ARNTL | CLOCK | ENSPVAP00000006338 | ENSPVAP00000008454 | Aryl hydrocarbon receptor nuclear translocator like. | Clock circadian regulator. | 0.986 |
ARNTL | CRY1 | ENSPVAP00000006338 | ENSPVAP00000001499 | Aryl hydrocarbon receptor nuclear translocator like. | Cryptochrome circadian regulator 1. | 0.999 |
ARNTL | CRY2 | ENSPVAP00000006338 | ENSPVAP00000003336 | Aryl hydrocarbon receptor nuclear translocator like. | Cryptochrome circadian regulator 2. | 0.998 |
ARNTL | CSNK1D | ENSPVAP00000006338 | ENSPVAP00000002261 | Aryl hydrocarbon receptor nuclear translocator like. | Casein kinase 1 delta. | 0.951 |
ARNTL | ENSPVAP00000009547 | ENSPVAP00000006338 | ENSPVAP00000009547 | Aryl hydrocarbon receptor nuclear translocator like. | annotation not available | 0.951 |
ARNTL | FBXL3 | ENSPVAP00000006338 | ENSPVAP00000001291 | Aryl hydrocarbon receptor nuclear translocator like. | F-box and leucine rich repeat protein 3. | 0.646 |
ARNTL | NPAS2 | ENSPVAP00000006338 | ENSPVAP00000011045 | Aryl hydrocarbon receptor nuclear translocator like. | Neuronal PAS domain protein 2. | 0.986 |
ARNTL | PER1 | ENSPVAP00000006338 | ENSPVAP00000015450 | Aryl hydrocarbon receptor nuclear translocator like. | Period circadian regulator 1. | 0.940 |
ARNTL | PER2 | ENSPVAP00000006338 | ENSPVAP00000005277 | Aryl hydrocarbon receptor nuclear translocator like. | Period circadian regulator 2. | 0.940 |
ARNTL | PER3 | ENSPVAP00000006338 | ENSPVAP00000005111 | Aryl hydrocarbon receptor nuclear translocator like. | Period circadian regulator 3. | 0.940 |
CLOCK | ARNTL | ENSPVAP00000008454 | ENSPVAP00000006338 | Clock circadian regulator. | Aryl hydrocarbon receptor nuclear translocator like. | 0.986 |
CLOCK | CRY1 | ENSPVAP00000008454 | ENSPVAP00000001499 | Clock circadian regulator. | Cryptochrome circadian regulator 1. | 0.985 |
CLOCK | CRY2 | ENSPVAP00000008454 | ENSPVAP00000003336 | Clock circadian regulator. | Cryptochrome circadian regulator 2. | 0.984 |
CLOCK | CSNK1D | ENSPVAP00000008454 | ENSPVAP00000002261 | Clock circadian regulator. | Casein kinase 1 delta. | 0.874 |
CLOCK | ENSPVAP00000009547 | ENSPVAP00000008454 | ENSPVAP00000009547 | Clock circadian regulator. | annotation not available | 0.874 |
CLOCK | FBXL3 | ENSPVAP00000008454 | ENSPVAP00000001291 | Clock circadian regulator. | F-box and leucine rich repeat protein 3. | 0.448 |
CLOCK | PER1 | ENSPVAP00000008454 | ENSPVAP00000015450 | Clock circadian regulator. | Period circadian regulator 1. | 0.889 |
CLOCK | PER2 | ENSPVAP00000008454 | ENSPVAP00000005277 | Clock circadian regulator. | Period circadian regulator 2. | 0.889 |
CLOCK | PER3 | ENSPVAP00000008454 | ENSPVAP00000005111 | Clock circadian regulator. | Period circadian regulator 3. | 0.889 |
CRY1 | ARNTL | ENSPVAP00000001499 | ENSPVAP00000006338 | Cryptochrome circadian regulator 1. | Aryl hydrocarbon receptor nuclear translocator like. | 0.999 |
page 1 of 5