STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GSC2Goosecoid homeobox 2. (206 aa)    
Predicted Functional Partners:
ZMAT1
Zinc finger matrin-type 1.
      
 0.769
RRP15
Ribosomal RNA processing 15 homolog.
    
 
 0.603
LDB2
LIM domain binding 2.
    
 0.594
LDB1
LIM domain binding 1.
    
 0.594
SRF
Serum response factor.
    
 0.583
PLRG1
Pleiotropic regulator 1.
      
 0.515
EN2
Engrailed homeobox 2.
    
0.495
ARRDC2
Arrestin domain containing 2.
      
 0.493
TCF4
Transcription factor 4.
    
  0.481
TCF12
Transcription factor 12.
    
  0.481
Your Current Organism:
Pteropus vampyrus
NCBI taxonomy Id: 132908
Other names: P. vampyrus, large flying fox
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.