STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TLX1T cell leukemia homeobox 1. (333 aa)    
Predicted Functional Partners:
LHX5
LIM homeobox 5.
    
 
 0.778
LHX1
LIM homeobox 1.
    
 
 0.626
LMX1B
LIM homeobox transcription factor 1 beta.
    
 
 0.623
LMX1A
LIM homeobox transcription factor 1 alpha.
    
 
 0.623
LMO2
LIM domain only 2.
    
 
 0.622
LYL1
LYL1 basic helix-loop-helix family member.
      
 0.605
TAL1
TAL bHLH transcription factor 1, erythroid differentiation factor.
      
 0.571
WT1
WT1 transcription factor.
    
 
 0.570
ZIC4
Zic family member 4.
   
 
 0.566
PTF1A
Pancreas associated transcription factor 1a.
      
 0.557
Your Current Organism:
Pteropus vampyrus
NCBI taxonomy Id: 132908
Other names: P. vampyrus, large flying fox
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.