STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RAB3CRAB3C, member RAS oncogene family. (227 aa)    
Predicted Functional Partners:
RIMS2
Regulating synaptic membrane exocytosis 2.
    
 0.970
SYT1
Synaptotagmin 1.
   
 0.795
SYT2
Synaptotagmin 2.
   
 0.795
VAMP1
Vesicle associated membrane protein 1.
   
 
 0.775
UNC13A
Unc-13 homolog A.
   
 
 0.774
SNAP25
Synaptosome associated protein 25.
   
 0.768
GDI2
GDP dissociation inhibitor 2.
   
 0.758
RIMS1
Regulating synaptic membrane exocytosis 1.
    
 0.738
SYTL4
Synaptotagmin like 4.
   
 0.735
SYT13
Synaptotagmin 13.
   
 0.735
Your Current Organism:
Pteropus vampyrus
NCBI taxonomy Id: 132908
Other names: P. vampyrus, large flying fox
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.