STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PHF12PHD finger protein 12. (992 aa)    
Predicted Functional Partners:
ENSPVAP00000000660
annotation not available
    
 
 0.999
GATAD1
GATA zinc finger domain containing 1.
    
 
 0.948
ARID4B
AT-rich interaction domain 4B.
    
 
 0.941
SIN3B
SIN3 transcription regulator family member B.
   
 
 0.940
SIN3A
SIN3 transcription regulator family member A.
   
 
 0.940
ARID4A
AT-rich interaction domain 4A.
    
 
 0.936
EMSY
EMSY transcriptional repressor, BRCA2 interacting.
   
 
 0.931
MORF4L2
Mortality factor 4 like 2.
    
 
 0.913
RBBP7
RB binding protein 7, chromatin remodeling factor.
    
 
 0.887
RBBP4
RB binding protein 4, chromatin remodeling factor.
    
 
 0.856
Your Current Organism:
Pteropus vampyrus
NCBI taxonomy Id: 132908
Other names: P. vampyrus, large flying fox
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.