STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCDC9BCoiled-coil domain containing 9B. (537 aa)    
Predicted Functional Partners:
ENSPVAP00000000799
annotation not available
    
  0.657
WDR18
WD repeat domain 18.
   
 0.651
VPS18
VPS18 core subunit of CORVET and HOPS complexes.
      
 0.645
TEX10
Testis expressed 10.
    
 0.626
HLA-DMA
Major histocompatibility complex, class II, DM alpha.
   
  0.609
DCTN5
Dynactin subunit 5.
    
 0.598
CAPN3
Calpain 3.
    
 
 0.593
ITGB3BP
Integrin subunit beta 3 binding protein.
  
 
  0.592
ENSPVAP00000016725
annotation not available
   
 0.592
HLA-DOA
Major histocompatibility complex, class II, DO alpha.
    
  0.586
Your Current Organism:
Pteropus vampyrus
NCBI taxonomy Id: 132908
Other names: P. vampyrus, large flying fox
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.