STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CIB4Calcium and integrin binding family member 4. (184 aa)    
Predicted Functional Partners:
LRGUK
Leucine rich repeats and guanylate kinase domain containing.
    
 0.811
TSSK4
Testis specific serine kinase 4.
    
 0.808
SSMEM1
Serine rich single-pass membrane protein 1.
      
 0.742
KSR2
Kinase suppressor of ras 2.
    
 0.740
PPP3CA
Protein phosphatase 3 catalytic subunit alpha.
    
 0.739
PPP3CC
Protein phosphatase 3 catalytic subunit gamma.
    
 0.739
PPP3CB
Protein phosphatase 3 catalytic subunit beta.
    
 0.739
C9orf116
Chromosome 9 open reading frame 116.
    
 
 0.681
SPEM1
Spermatid maturation 1.
    
 
 0.673
WHRN
Whirlin.
    
 
 0.659
Your Current Organism:
Pteropus vampyrus
NCBI taxonomy Id: 132908
Other names: P. vampyrus, large flying fox
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.