STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMC1AStructural maintenance of chromosomes 1A. (1232 aa)    
Predicted Functional Partners:
NIPBL
NIPBL cohesin loading factor.
   
 0.999
RAD21
RAD21 cohesin complex component.
   
 0.999
SMC3
Structural maintenance of chromosomes 3.
   
0.999
STAG1
Stromal antigen 1.
   
 0.998
STAG2
Stromal antigen 2.
   
 0.998
PDS5A
PDS5 cohesin associated factor A.
   
 0.980
STAG3
Stromal antigen 3.
   
 0.979
WAPL
WAPL cohesin release factor.
    
 0.977
PDS5B
PDS5 cohesin associated factor B.
   
 0.975
REC8
REC8 meiotic recombination protein.
   
 0.960
Your Current Organism:
Pteropus vampyrus
NCBI taxonomy Id: 132908
Other names: P. vampyrus, large flying fox
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.